Example data¶

The CIAtah repository contains several example one-photon calcium imaging movies from miniature microscope experiments in freely moving rodents.

To download example data, run loadDependencies module (e.g. obj.loadDependencies) and select Download test one-photon data. option to download one-photon miniature microscope example datasets to use for testing CIAtah preprocessing, cell extraction, and cell classification code. The data will be located in the data folder within the repository root directory.

Else run example_downloadTestData.m from the MATLAB command line with the working directory set to the CIAtah repository.